Invasive nontyphoidal salmonella

Invasive salmonellosis in paediatric patients in the Northern Territory, Australia, 2005-2015

Submitted by stanaway on Mon, 05/27/2024 - 13:20

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General Info

Geography:

Australia (AUS)
Northern Territory

Coverage type:

Country

Time period covered:

01/2005 - 12/2015

Data type:

Scientific literature

Keywords:

Citation

Authors:

Hamilton NJ, Draper ADK, Baird R, Wilson A, Ford T, Francis JR

Journal:

J Paediatr Child Health

Volume:

Issue:

Pages:

1397-1401

Publication year:

2021

Suggested citation:

Hamilton NJ, Draper ADK, Baird R, Wilson A, Ford T, Francis JR. Invasive salmonellosis in paediatric patients in the Northern Territory, Australia, 2005-2015. J Paediatr Child Health. 2021; 57(9): 1397-1401.

DOI:

101111jpc15473

PMID:

33847439

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GHDx Entry last modified on: Jul 10, 2024

A Population-Based Study on the Incidence, Risk Factors, and Outcome of Salmonella Bloodstream Infections in South Sweden 2012-2022

Submitted by stanaway on Mon, 05/27/2024 - 12:53

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General Info

Geography:

Skåne
Sweden (SWE)

Coverage type:

Country

Time period covered:

01/2012 - 12/2022

Data type:

Scientific literature

Keywords:

Citation

Authors:

Björklund L, Mattisson Y, Bläckberg A, Sunnerhagen T, Ljungquist O

Journal:

Infect Dis Ther

Volume:

Issue:

Pages:

501-519

Publication year:

2024

Suggested citation:

Björklund L, Mattisson Y, Bläckberg A, Sunnerhagen T, Ljungquist O. A Population-Based Study on the Incidence, Risk Factors, and Outcome of Salmonella Bloodstream Infections in South Sweden 2012-2022. Infect Dis Ther. 2024; 13(3): 501-519.

DOI:

101007s4012102400929y

PMID:

38393503

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GHDx Entry last modified on: Jul 10, 2024

Incidence of invasive non-typhoidal Salmonella in Blantyre, Malawi between January 2011-December 2019

Submitted by stanaway on Fri, 05/24/2024 - 16:24

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General Info

Geography:

Blantyre
Malawi (MWI)

Coverage type:

Subnational

Time period covered:

01/2011 - 12/2019

Data type:

Scientific literature

Keywords:

Invasive nontyphoidal salmonella

Citation

Authors:

Wilson CN, Chunga A, Masesa C, Denis B, Silungwe N, Bilima S, Galloway H, Gordon M, Feasey NA

Journal:

Wellcome Open Res

Volume:

Issue:

Pages:

143

Publication year:

2022

Suggested citation:

Wilson CN, Chunga A, Masesa C, Denis B, Silungwe N, Bilima S, Galloway H, Gordon M, Feasey NA. Incidence of invasive non-typhoidal Salmonella in Blantyre, Malawi between January 2011-December 2019. Wellcome Open Res. 2022; 7(1): 143.

DOI:

1012688wellcomeopenres177541

PMID:

37153453

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GHDx Entry last modified on: Jul 10, 2024

Salmonella infections in Denmark from 2013-2022 with focus on serotype distribution, invasiveness, age, sex, and travel exposition

Submitted by stanaway on Fri, 05/24/2024 - 13:32

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General Info

Geography:

Denmark (DNK)

Coverage type:

Country

Time period covered:

01/2013 - 12/2022

Data type:

Scientific literature

Keywords:

Citation

Authors:

Aarø NS, Torpdahl M, Rasmussen T, Jensen M, Nielsen HL, Danish Study Group for Enteric Infection has the following members

Journal:

Eur J Clin Microbiol Infect Dis

Volume:

Issue:

Pages:

947-957

Publication year:

2024

Suggested citation:

Aarø NS, Torpdahl M, Rasmussen T, Jensen M, Nielsen HL, Danish Study Group for Enteric Infection has the following members. Salmonella infections in Denmark from 2013-2022 with focus on serotype distribution, invasiveness, age, sex, and travel exposition. Eur J Clin Microbiol Infect Dis. 2024; 43(5): 947-957.

DOI:

101007s10096024048089

PMID:

38512514

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GHDx Entry last modified on: Jul 10, 2024

Epidemiology and antimicrobial resistance of invasive non-typhoidal Salmonellosis in rural Thailand from 2006-2014

Submitted by stanaway on Thu, 05/23/2024 - 14:34

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General Info

Geography:

Nakhon Phanom
Thailand (THA)

Coverage type:

Country

Time period covered:

01/2006 - 12/2014

Data type:

Scientific literature

Keywords:

Invasive nontyphoidal salmonella

Citation

Authors:

Whistler T, Sapchookul P, McCormick DW, Sangwichian O, Jorakate P, Makprasert S, Jatapai A, Naorat S, Surin U, Koosakunwat S, Supcharassaeng S, Piralam B, Mikoleit M, Baggett HC, Rhodes J, Gregory CJ

Journal:

PLoS Negl Trop Dis

Volume:

Issue:

Pages:

e0006718

Publication year:

2018

Suggested citation:

Whistler T, Sapchookul P, McCormick DW, Sangwichian O, Jorakate P, Makprasert S, Jatapai A, Naorat S, Surin U, Koosakunwat S, Supcharassaeng S, Piralam B, Mikoleit M, Baggett HC, Rhodes J, Gregory CJ. Epidemiology and antimicrobial resistance of invasive non-typhoidal Salmonellosis in rural Thailand from 2006-2014. PLoS Negl Trop Dis. 2018; 12(8): e0006718.

DOI:

101371journalpntd0006718

PMID:

30080897

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GHDx Entry last modified on: Jul 10, 2024

WHO Americas Region Bacterial Antimicrobial Resistance Burden Estimates 2019

Submitted by jmihalik on Fri, 07/28/2023 - 12:11

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General Info

Provider:

Institute for Health Metrics and Evaluation (IHME)

Geography:

Antigua and Barbuda (ATG)
Argentina (ARG)
Bahamas (BHS)
Barbados (BRB)
Belize (BLZ)
Bolivia (BOL)
Brazil (BRA)
Canada (CAN)
Chile (CHL)
Colombia (COL)
Costa Rica (CRI)
Cuba (CUB)
Dominica (DMA)
Dominican Republic (DOM)
Ecuador (ECU)
El Salvador (SLV)
Grenada (GRD)
Guatemala (GTM)
Guyana (GUY)
Haiti (HTI)
Honduras (HND)
Jamaica (JAM)
Mexico (MEX)
Nicaragua (NIC)
Panama (PAN)
Paraguay (PRY)
Peru (PER)
Saint Kitts and Nevis (KNA)
Saint Lucia (LCA)
Saint Vincent and the Grenadines (VCT)
Suriname (SUR)
Trinidad and Tobago (TTO)
United States of America (USA)
Uruguay (URY)
Venezuela (Bolivarian Republic of) (VEN)

Coverage type:

Country

Time period covered:

01/2019 - 12/2019

Data type:

Estimate

Summary:

Researchers at IHME and the University of Oxford produced estimates of deaths, disability-adjusted life years (DALYs), years lived with disability (YLDs), and years of life lost (YLLs) associated with and attributable to bacterial antimicrobial resistance (AMR) in 88 pathogen-drug combinations for the WHO Region of the Americas and for 35 countries within this geographical region in 2019. A variety of data were gathered to inform these estimates, including multiple cause of death data, hospital discharges, minimally invasive tissue sampling, systematic literature reviews, and microbiology lab results from hospitals and national and multi-national surveillance systems, with a total of 343 million individual records or isolates and 11,361 study-location-years collected. These data informed 8 modelling components which were then combined with results from GBD 2019 to estimate the burden of AMR. Estimates were produced for two counterfactual scenarios: no infection and drug-susceptible infection.

Citation

Contributors:

Funders:

Publisher:

Institute for Health Metrics and Evaluation (IHME)

Publication year:

2023

Suggested citation:

Institute for Health Metrics and Evaluation (IHME), University of Oxford. WHO Americas Region Bacterial Antimicrobial Resistance Burden Estimates 2019. Seattle, United States of America: Institute for Health Metrics and Evaluation (IHME), 2023.

DOI:

https://doi.org/10.6069/9YZJ-YC13

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Terms and conditions

Data made available for download on IHME Websites can be used, shared, modified or built upon by non-commercial users in accordance with the IHME FREE-OF-CHARGE NON-COMMERCIAL USER AGREEMENT. For more information (and inquiries about commercial use), visit IHME Terms and Conditions.

Public files:

Attachment	Size
Data Release Information Sheet	221.42 KB
Bacterial AMR burden estimates 2019: number and rate of deaths [CSV]	20.76 MB
Bacterial AMR burden estimates 2019: number and rate of Disability-Adjusted Life Years (DALYs) [CSV]	21.21 MB
Bacterial AMR burden estimates 2019: number and rate of Years of Life Lost (YLLs) [CSV]	20.83 MB
Bacterial AMR burden estimates 2019: number and rate of Years Lived with Disability (YLDs) [CSV]	20.96 MB
Codebook [CSV]	3.45 KB
Data Input Sources [XLSX]	763.36 KB

Code files used to produce these data

Need help downloading files?

GHDx Entry last modified on: Aug 14, 2023

Massive emergence of multidrug-resistant Enterobacteriaceae in blood culture isolates of children in Ghana

Submitted by jrello on Wed, 05/17/2023 - 10:01

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General Info

Geography:

Ghana (GHA)

Coverage type:

Country

Time period covered:

01/2007 - 12/2009

Data type:

Scientific literature

Keywords:

Citation

Authors:

Huenger F, Agyekum A, Nkrumah B, Ekuban S, Sarpong N, Schwarz NG, Schutt-Gerowitt H, May J, Adu-Sarkodie Y

Journal:

Clin Microbiol Infect

Volume:

Pages:

S88

Publication year:

2012

Suggested citation:

Huenger F, Agyekum A, Nkrumah B, Ekuban S, Sarpong N, Schwarz NG, Schutt-Gerowitt H, May J, Adu-Sarkodie Y. Massive emergence of multidrug-resistant Enterobacteriaceae in blood culture isolates of children in Ghana. Clin Microbiol Infect. 2012; 18: S88.

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GHDx Entry last modified on: May 23, 2024

WHO European Region Bacterial Antimicrobial Resistance Burden Estimates 2019

Submitted by brentb4 on Wed, 10/12/2022 - 10:55

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General Info

Provider:

Institute for Health Metrics and Evaluation (IHME)

Geography:

Coverage type:

Country

Time period covered:

01/2019 - 12/2019

Data type:

Estimate

Summary:

Researchers at IHME and the University of Oxford produced estimates of deaths, disability-adjusted life years (DALYs), years lived with disability (YLDs), and years of life lost (YLLs) associated with and attributable to bacterial antimicrobial resistance (AMR) in 88 pathogen-drug combinations for 53 countries within the WHO European Region in 2019. A variety of data were gathered to inform these estimates, including multiple cause of death data, hospital discharges, minimally invasive tissue sampling, systematic literature reviews, and microbiology lab results from hospitals and national and multi-national surveillance systems, with a total of 471 million individual records or isolates and 7,585 study-location-years collected. These data informed 8 modelling components which were then combined with results from GBD 2019 to estimate the burden of AMR. Estimates were produced for two counterfactual scenarios: no infection and drug-susceptible infection.

Citation

Contributors:

Funders:

Publisher:

Institute for Health Metrics and Evaluation (IHME)

Publication year:

2022

Suggested citation:

Institute for Health Metrics and Evaluation (IHME), University of Oxford. WHO European Region Bacterial Antimicrobial Resistance Burden Estimates 2019. Seattle, United States of America: Institute for Health Metrics and Evaluation (IHME), 2022.

DOI:

10.6069/0Q0X-4616

Files

Terms and conditions

Public files:

Attachment	Size
Data Release Information Sheet	640.72 KB
Bacterial AMR burden estimates 2019: number and rate of deaths [CSV]	14.7 MB
Bacterial AMR burden estimates 2019: number and rate of Disability-Adjusted Life Years (DALYs) [CSV]	16.22 MB
Bacterial AMR burden estimates 2019: number and rate of Years of Life Lost (YLLs) [CSV]	15.9 MB
Bacterial AMR burden estimates 2019: number and rate of Years Lived with Disability (YLDS) [CSV]	14.78 MB
Codebook [CSV]	4.06 KB
Data Input Sources [XLSX]	763.36 KB
Extraction Template [XLSX]	12.77 KB

Code files used to produce these data

Need help downloading files?

GHDx Entry last modified on: Jan 3, 2024

Etiologic agents of bacterial sepsis and their antibiotic susceptibility patterns among patients living with human immunodeficiency virus at Gondar University Teaching Hospital, Northwest Ethiopia

Submitted by leneal on Tue, 08/02/2022 - 10:42

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General Info

Geography:

Ethiopia (ETH)

Coverage type:

Country

Time period covered:

01/2013 - 12/2013

Data type:

Scientific literature

Keywords:

Citation

Authors:

Alebachew G, Teka B, Endris M, Shiferaw Y, Tessema B

Journal:

Biomed Res Int

Volume:

2016

Publication year:

2016

Suggested citation:

Alebachew G, Teka B, Endris M, Shiferaw Y, Tessema B. Etiologic agents of bacterial sepsis and their antibiotic susceptibility patterns among patients living with human immunodeficiency virus at Gondar University Teaching Hospital, Northwest Ethiopia. Biomed Res Int. 2016; 2016.

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GHDx Entry last modified on: May 23, 2024

First description of CTX-M beta-lactamase-producing clinical Escherichia coli isolates from Egypt

Submitted by leneal on Tue, 08/02/2022 - 10:41

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General Info

Geography:

Egypt (EGY)

Coverage type:

Country

Time period covered:

01/2001 - 12/2001

Data type:

Scientific literature

Keywords:

Citation

Authors:

Al-Agamy MHM, Ashour MSE-D, Wiegand I

Journal:

Int J Antimicrob Agents

Volume:

Issue:

Pages:

545-8

Publication year:

2006

Suggested citation:

Al-Agamy MHM, Ashour MSE-D, Wiegand I. First description of CTX-M beta-lactamase-producing clinical Escherichia coli isolates from Egypt. Int J Antimicrob Agents. 2006; 27(6): 545-8.

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GHDx Entry last modified on: May 23, 2024

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Invasive nontyphoidal salmonella

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